PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142276.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WOX

Protein Properties

Length: 367aa MW: 39888.6 Da PI: 8.3333

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.3	2.3e-17	58	118	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_022142276.1 58 KPRWNPKPEQIRILEGIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKN 118 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.2	5.5e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe +++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_022142276.1 57 PKPRWNPKPEQIRILEGIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKNK 119 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTNSCLR SAPYTTVGGC EERSPEPKPR 60 WNPKPEQIRI LEGIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKNKL 120 RHIQNSKSNN NNTHSHSQTQ TTPLTATATA TATATATATC SSSSSSDKSS PKSAPTKAFV 180 SNSATENYLQ QPTSEVLREP FLFPASHGGQ GLCFSELCSV VQNNVPEHGV GPCTSLLLSE 240 IMSPSEPSKK YLDQEKIMVK LQPQFINSFT PSLPQTTIST SLSLPSPTNS IPGAGIGEVC 300 GVGQSCVAKS TVFINGVAFE VGSGPLNVRE AFGDEAVLIH STGQPVLTNE WGLTLHSLQH 360 GASYYLI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTNSCLR SAPYTTVGGC EERSPEPKPR  60
WNPKPEQIRI LEGIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKNKL  120
RHIQNSKSNN NNTHSHSQTQ TTPLTATATA TATATATATC SSSSSSDKSS PKSAPTKAFV  180
SNSATENYLQ QPTSEVLREP FLFPASHGGQ GLCFSELCSV VQNNVPEHGV GPCTSLLLSE  240
IMSPSEPSKK YLDQEKIMVK LQPQFINSFT PSLPQTTIST SLSLPSPTNS IPGAGIGEVC  300
GVGQSCVAKS TVFINGVAFE VGSGPLNVRE AFGDEAVLIH STGQPVLTNE WGLTLHSLQH  360
GASYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-60	WOX family protein