PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142333.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 481aa    MW: 54161.3 Da    PI: 6.2429
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53e-2051106156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++  ++t++q++e+e++F+++++p+ ++r eL+++lgL+  qVk+WFqN+R+++k
  XP_022142333.1  51 KKRYNRHTQHQIQEMEAFFKECPHPDDKQRMELSRELGLEPLQVKFWFQNKRTQMK 106
                     577789***********************************************998 PP
2START181.35.4e-572424631206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++el ++a+a+ep+Wv          +n+ e+l++f  + +     +++ea+r+s++v+m++ +lv +++d   qW++ +     +a+ 
  XP_022142333.1 242 ELAVSAMEELTRMAQAGEPLWVPGDnksteLLLNEAEYLSTFRGGIGpkplgFRTEASRVSAIVFMNHLKLVDIFMDAT-QWSTVFCsivsRASN 335
                     57899****************9766665556689********77777********************************.******99999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     +e +s g      gal++m+ae+q++splvp R+ +fvRy++ql++ +w+++dvS+ds ++ p      +++++pSg+li++++ng+sk+twveh
  XP_022142333.1 336 VELLSAGlpgncnGALHVMSAEFQVPSPLVPtRENYFVRYCKQLNDATWAVADVSLDSLRPSPI----PKSRRRPSGCLIQELPNGYSKITWVEH 426
                     *************************************************************994....55556********************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++  ++ ++r+lv+sgla gak+wvatl+rqce+
  XP_022142333.1 427 VEVDETGVPTMYRPLVSSGLAYGAKRWVATLDRQCER 463
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    
MFDPDMFEQQ HHHMLDMAFN TSENELENVR DDEFETKSGA EILNADHRSK KKRYNRHTQH  60
QIQEMEAFFK ECPHPDDKQR MELSRELGLE PLQVKFWFQN KRTQMKAQHE RHENAILKAE  120
NEKLRGENIR YREALAHSTC PNCGSSTAAL GEMSFDDQHL RIENSRLREE IDRMSGYGPK  180
CVAKPLASSY YHLPSNTPAR SLDLGIANFG QQTGFVGEMY GAADFLLSVS RPSEADKPVI  240
VELAVSAMEE LTRMAQAGEP LWVPGDNKST ELLLNEAEYL STFRGGIGPK PLGFRTEASR  300
VSAIVFMNHL KLVDIFMDAT QWSTVFCSIV SRASNVELLS AGLPGNCNGA LHVMSAEFQV  360
PSPLVPTREN YFVRYCKQLN DATWAVADVS LDSLRPSPIP KSRRRPSGCL IQELPNGYSK  420
ITWVEHVEVD ETGVPTMYRP LVSSGLAYGA KRWVATLDRQ CERLATSMAT TIATADLRGT  480
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein