PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142672.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 251aa    MW: 28637.5 Da    PI: 6.3018
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.14.6e-42171472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     ppGfrF Pt+eel+++yL++++ g+  e ++v++ ++iy++ePwdLp+     +++++++w+f ++r++++a+g r++r+t++gyWkatg+   v
  XP_022142672.1  17 PPGFRFYPTEEELISFYLRHQLVGTIPEKHRVVPLLNIYDSEPWDLPNfageLCRGDSEQWFFLVPRQEREARGGRPSRTTAAGYWKATGSPVYV 111
                     9************************9999999***************646654455777************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s+ ++++glkkt+vfy+grap+g+kt+W m+eyr+
  XP_022142672.1 112 YSSCSKVIGLKKTMVFYRGRAPTGTKTKWKMNEYRA 147
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MAMAMAIGEK EAKEEYPPGF RFYPTEEELI SFYLRHQLVG TIPEKHRVVP LLNIYDSEPW  60
DLPNFAGELC RGDSEQWFFL VPRQEREARG GRPSRTTAAG YWKATGSPVY VYSSCSKVIG  120
LKKTMVFYRG RAPTGTKTKW KMNEYRAIDE EAKLRHEFSL CRVYVISGCF RAFDRRPMEA  180
TVGGPERRGK KTVQMARSPE TSCSVPGTAE ISGECAGSCS NLGMVEEDEE FEEALWEWDQ  240
IDFGPRIQKI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.13e-80NAC family protein