PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142918.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 434aa MW: 46802.2 Da PI: 6.8958

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.8	1.6e-37	38	148	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++s + ++++++ +++n+ + XP_022142918.1 38 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWNPSTAnaaTQQQEHLNDENE--Nllsvq 130 79**************************************************************55555444222333333333332..244666 PP TCP 89 .................k 89 + XP_022142918.1 131 cdvynttgnrratvvgsN 148 666666544444444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MGDSHRQTTT SSRLGMRTGG SGGGEIVEVQ GGHIVRSTGR KDRHSKVCTA KGPRDRRVRL 60 SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKAAIDELAE LPAWNPSTAN AATQQQEHLN 120 DENENLLSVQ CDVYNTTGNR RATVVGSNSR VSEFPLQNLQ HTQMGEGTNN STSSFLPPSL 180 DSDSIADTIK SFFPIGTAAA AETTSSSIQF QNYPLDLLSR TSSQNQDLRL SLQSFQDPIS 240 IHRHHQAQHQ SQGHQSEHVL FSGTAALSGF DVTTAGWSEH NNLTPAEISR FPRLTSWNAT 300 GAETGSVGGS GGSGHGGAGI RNAGYVFNSQ HLPAALPPSP FMQPLFGENQ FFSQRGPLQS 360 SNTPSIRAWI DPSLAATDHQ QHQMPPSIHQ SSFTGLGFAS GGFSGFHIPT RIQGEEEHDG 420 ISDKPSSASS DSRH

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MGDSHRQTTT SSRLGMRTGG SGGGEIVEVQ GGHIVRSTGR KDRHSKVCTA KGPRDRRVRL  60
SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKAAIDELAE LPAWNPSTAN AATQQQEHLN  120
DENENLLSVQ CDVYNTTGNR RATVVGSNSR VSEFPLQNLQ HTQMGEGTNN STSSFLPPSL  180
DSDSIADTIK SFFPIGTAAA AETTSSSIQF QNYPLDLLSR TSSQNQDLRL SLQSFQDPIS  240
IHRHHQAQHQ SQGHQSEHVL FSGTAALSGF DVTTAGWSEH NNLTPAEISR FPRLTSWNAT  300
GAETGSVGGS GGSGHGGAGI RNAGYVFNSQ HLPAALPPSP FMQPLFGENQ FFSQRGPLQS  360
SNTPSIRAWI DPSLAATDHQ QHQMPPSIHQ SSFTGLGFAS GGFSGFHIPT RIQGEEEHDG  420
ISDKPSSASS DSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-77	TCP family protein