PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143102.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 284aa MW: 33247.1 Da PI: 7.5358

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	15	45	2	32
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg 32 + W +eEd +l ++v+ +G g+W+t++++ g XP_022143102.1 15 NLWKPEEDMILRNYVETHGEGNWATVSQESG 45 56**************************998 PP
2	Myb_DNA-binding	52.2	1.4e-16	113	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022143102.1 113 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 158 67789***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MEEESKAMKQ QPKKNLWKPE EDMILRNYVE THGEGNWATV SQESGKIISP KTISNNLYKT 60 YSSFSELYSE ERYNNRQWWT DFLENITYIS GLMRGGKSCR LRWKNYLRPN IKRGGMSKEE 120 EDLIIRMHKL LGNRWSLIAG RLPGRTDNEV KNYWNTHLNK NGLQDKRKAN DSKDHKKNDD 180 DDDDANNKKQ KKVINQTCYP QPPICSNNGK NVAHDTERGN QEEKRIVTDP WNMDDITSSH 240 YYMNSPMVPA NNTTFNFDDE PFFDPFFLYE AFGCSGVNAS LEKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-54	MYB family protein