PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143103.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 238aa MW: 27663.9 Da PI: 7.5421

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143103.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	15	61	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd +l ++v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_022143103.1 15 NLWKPEEDMILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 61 56*******************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022143103.1 67 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 112 67799***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MEEESKAMKQ QPKKNLWKPE EDMILRNYVE THGEGNWATV SQESGLMRGG KSCRLRWKNY 60 LRPNIKRGGM SKEEEDLIIR MHKLLGNRWS LIAGRLPGRT DNEVKNYWNT HLNKNGLQDK 120 RKANDSKDHK KNDDDDDDAN NKKQKKVINQ TCYPQPPICS NNGKNVAHDT ERGNQEEKRI 180 VTDPWNMDDI TSSHYYMNSP MVPANNTTFN FDDEPFFDPF FLYEAFGCSG VNASLEKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-63	MYB family protein