PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143120.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 701aa    MW: 77212.6 Da    PI: 6.1039
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.71.1e-27214267155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++F+ av++L G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYR 
  XP_022143120.1 214 KPRVDWNGELHRKFIAAVNHL-GIEKAVPKKILDLMNVEGLTRENVASHLQKYRQ 267
                     79*******************.********************************6 PP
2Myb_DNA-binding32.51.9e-10216266148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W  e++ +++ av+ lG +   +k+I   m+ +g+t++++ s++qky+
   XP_022143120.1 216 RVDWNGELHRKFIAAVNHLGIEkaVPKKILDLMNvEGLTRENVASHLQKYR 266
                      567999********************************************7 PP
3Response_reg84.53.2e-28301381109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l vdD+p+ +++l+++l+k +y +v+++ ++ eal++l++++  +Dl++ D++mp+mdG++ll+     e++lp+i+++ah++ e++ + +  G
  XP_022143120.1  30 ILAVDDDPICLKVLENLLRKCQY-RVTSTNQAAEALKMLRKNRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSAHSDFELVAKGVTHG 122
                     799********************.***************998889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022143120.1 123 ACDYLLKPVRIEELKN 138
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    
MPLAMTVEDK RANLGGANGD VDQFPIGMSI LAVDDDPICL KVLENLLRKC QYRVTSTNQA  60
AEALKMLRKN RNKFDLVISD VNMPDMDGFK LLELVGLEMD LPVIMMSAHS DFELVAKGVT  120
HGACDYLLKP VRIEELKNIW QHVFRRDKFS AKNQNKCTNG NKASCQTVEV AKGFPSVVGA  180
GNGKPGKRRK DQDDNEEGGE EENSYENDDS TQKKPRVDWN GELHRKFIAA VNHLGIEKAV  240
PKKILDLMNV EGLTRENVAS HLQKYRQYLK KMCTREAQQH NMMAAFGGKD TSFRPPMASL  300
NGFSMTGTRR LSNTTFSSYP SGEIVGRLNS TAGLSLHGIA SSGMIQQGTF HNSSSLLDTF  360
GKLYPALFLS NRPPSIFDGI STSSDCIQPL QDRHTMQFKD FNLINDASSF TVSTSCPDAR  420
VTVGSSSNYD LGISSHPSML QGHKQQIHGS GELGDQSPLN VSLINPESLD RSTGLSNILC  480
HGQSNRNWQG SIQLSKLASN FSLTGIYPPD GMPTINLTIS STQPDNDNFP VGFPSTSVDS  540
SSQLDLRGET QCYEELIGSV VETMNGRPEQ QWEVAKQDYN SNHSSSVRKS LVSVDGIADP  600
LRQSTDQKKY RKIGSSFTNQ LDTGAPSFIQ HSAEISAIDT WMNYDGKILM DPTKLQNGFK  660
NASFNSLEEL VNAMSKQEQD QSIQMNDEFG FDAQSLGSSC I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-107ARR-B family protein