PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143121.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 697aa    MW: 76800 Da    PI: 6.1039
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.71.1e-27210263155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++F+ av++L G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYR 
  XP_022143121.1 210 KPRVDWNGELHRKFIAAVNHL-GIEKAVPKKILDLMNVEGLTRENVASHLQKYRQ 263
                     79*******************.********************************6 PP
2Myb_DNA-binding32.61.9e-10212262148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W  e++ +++ av+ lG +   +k+I   m+ +g+t++++ s++qky+
   XP_022143121.1 212 RVDWNGELHRKFIAAVNHLGIEkaVPKKILDLMNvEGLTRENVASHLQKYR 262
                      567999********************************************7 PP
3Response_reg84.53.1e-28261341109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l vdD+p+ +++l+++l+k +y +v+++ ++ eal++l++++  +Dl++ D++mp+mdG++ll+     e++lp+i+++ah++ e++ + +  G
  XP_022143121.1  26 ILAVDDDPICLKVLENLLRKCQY-RVTSTNQAAEALKMLRKNRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSAHSDFELVAKGVTHG 118
                     799********************.***************998889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022143121.1 119 ACDYLLKPVRIEELKN 134
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MTVEDKRANL GGANGDVDQF PIGMSILAVD DDPICLKVLE NLLRKCQYRV TSTNQAAEAL  60
KMLRKNRNKF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MMSAHSDFEL VAKGVTHGAC  120
DYLLKPVRIE ELKNIWQHVF RRDKFSAKNQ NKCTNGNKAS CQTVEVAKGF PSVVGAGNGK  180
PGKRRKDQDD NEEGGEEENS YENDDSTQKK PRVDWNGELH RKFIAAVNHL GIEKAVPKKI  240
LDLMNVEGLT RENVASHLQK YRQYLKKMCT REAQQHNMMA AFGGKDTSFR PPMASLNGFS  300
MTGTRRLSNT TFSSYPSGEI VGRLNSTAGL SLHGIASSGM IQQGTFHNSS SLLDTFGKLY  360
PALFLSNRPP SIFDGISTSS DCIQPLQDRH TMQFKDFNLI NDASSFTVST SCPDARVTVG  420
SSSNYDLGIS SHPSMLQGHK QQIHGSGELG DQSPLNVSLI NPESLDRSTG LSNILCHGQS  480
NRNWQGSIQL SKLASNFSLT GIYPPDGMPT INLTISSTQP DNDNFPVGFP STSVDSSSQL  540
DLRGETQCYE ELIGSVVETM NGRPEQQWEV AKQDYNSNHS SSVRKSLVSV DGIADPLRQS  600
TDQKKYRKIG SSFTNQLDTG APSFIQHSAE ISAIDTWMNY DGKILMDPTK LQNGFKNASF  660
NSLEELVNAM SKQEQDQSIQ MNDEFGFDAQ SLGSSCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-107ARR-B family protein