PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143163.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GeBP

Protein Properties

Length: 384aa MW: 43691.6 Da PI: 4.835

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	91.9	7e-29	115	212	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +w++eDei lL+G+++f +++ +++d afy+++k +i++ k+ql++K+rrLK+K++ ++k++sg++psf++ hd+++f++s+k XP_022143163.1 115 TNIWTNEDEIELLRGFLEFSSDNRIsghrLQQQDAAAFYRKIKPKIQLCCDKNQLIDKLRRLKRKYQITSSKIDSGEKPSFRSLHDRSTFDISRK 209 579**************99998755544567********************************************************** PP DUF573 95 iWg 97 iWg XP_022143163.1 210 IWG 212 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MTWPLSGWIF SSSSSSSMEE DQNTQLSDEP GTPLNDDGDH ADYLRQDPEI DEQNAAVSDD 60 ETDAADLRQS KTNSFSPIED HIPTAIVIPA NAPNNVVTVA IPAARIQERR PQRRTNIWTN 120 EDEIELLRGF LEFSSDNRIS GHRLQQQDAA AFYRKIKPKI QLCCDKNQLI DKLRRLKRKY 180 QITSSKIDSG EKPSFRSLHD RSTFDISRKI WGRSSGKKQT PAEDSILDEV LADISPNYIN 240 IKVKREDPED ESEERDDLQQ STKRRRTAFL SGEASNSIEI PMRPSSTTDD IGKISGLVEE 300 VARACLTPLF KELMSNRWPP IGLAGRIPSY GGGEAADERW RKQQAMEMEV YLKRLELVQE 360 EIRASLKELR SKEEESKNKL QDDN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MTWPLSGWIF SSSSSSSMEE DQNTQLSDEP GTPLNDDGDH ADYLRQDPEI DEQNAAVSDD  60
ETDAADLRQS KTNSFSPIED HIPTAIVIPA NAPNNVVTVA IPAARIQERR PQRRTNIWTN  120
EDEIELLRGF LEFSSDNRIS GHRLQQQDAA AFYRKIKPKI QLCCDKNQLI DKLRRLKRKY  180
QITSSKIDSG EKPSFRSLHD RSTFDISRKI WGRSSGKKQT PAEDSILDEV LADISPNYIN  240
IKVKREDPED ESEERDDLQQ STKRRRTAFL SGEASNSIEI PMRPSSTTDD IGKISGLVEE  300
VARACLTPLF KELMSNRWPP IGLAGRIPSY GGGEAADERW RKQQAMEMEV YLKRLELVQE  360
EIRASLKELR SKEEESKNKL QDDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-43	GeBP family protein