PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143383.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 261aa MW: 29521 Da PI: 5.3773

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ + G +W+++++ g+ R++k+c++rw +yl XP_022143383.1 14 KGPWTSEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.1	3.1e-16	74	111	8	47
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E+++ +d+++qlG++ W++Ia+ ++ gRt++++k++w+++ XP_022143383.1 74 EEKRVIDLHAQLGNR-WSKIASQLP-GRTDNEIKNHWNTH 111 9************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRQPCCEKV GLKKGPWTSE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDFEEKRVID LHAQLGNRWS KIASQLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPQTHKPIS IPTDQFQPHH QRHPVTEPSL DSLTVAEVEE VQETTSTTII EPQITLDPCM 180 PSSSSTSSSS SSSSSSSSNT NPIEFDDLEF SDFEWVNSND ASNNGIEIGF WEDDFSSWDF 240 LVGHEDGEVP IFQESWTCGS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	1e-88	MYB family protein