PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143488.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 165aa    MW: 17939.9 Da    PI: 9.8311
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.26.8e-062142223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    kC+ Cgk F++   L  H+r+H
  XP_022143488.1 21 KCGLCGKLFRTMKALYGHMRSH 42
                    7********************9 PP
2zf-C2H211.40.00099106128123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ Cgk F ++  L  H ++H
  XP_022143488.1 106 YRCNVCGKEFWSPQALGGHKSSH 128
                     9*********8888888887777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MADGGNNGVV IEVKLSINSS KCGLCGKLFR TMKALYGHMR SHPDRTWRGM HPTPSSSSSS  60
AAASTPLPTW SVTGRRGRKR TSSAAASTSN SNDEHDSSSK KKVHVYRCNV CGKEFWSPQA  120
LGGHKSSHYK PEKTDFVVQT SSSGRRTVDF DLNELPPMDD HGEAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.17e-13C2H2 family protein