PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143611.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 255aa    MW: 29410.2 Da    PI: 5.7027
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+++Ed++l++ +++ G  +W++ +++ g+ R++k+c++rw +yl
   XP_022143611.1 14 RGPWSPQEDQILINFIQLNGHSNWRALPKKAGLLRCGKSCRLRWTNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding49.41.1e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_022143611.1  67 RGDFTIEEEQTIINLHQMLGNR-WAAIAAKLP-GRTDNEIKNVWHTHL 112
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MGRAPCCEKV GLKRGPWSPQ EDQILINFIQ LNGHSNWRAL PKKAGLLRCG KSCRLRWTNY  60
LRPDIKRGDF TIEEEQTIIN LHQMLGNRWA AIAAKLPGRT DNEIKNVWHT HLKKRSLNQN  120
QTLKDHSQLK KKSCLRDRPP YSVIKSDSGE KIDHRTMNNT DNNVSDNDTK LVELAFAEDF  180
LKNLLSEEEF FDIDSNLEKD YNCGMVINDE VEIPLSGEEF NSCGSSETLD IMDFWRSVFM  240
RDGELPEVLE ESNII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-75MYB family protein