PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143709.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family AP2
Protein Properties Length: 245aa    MW: 27038.3 Da    PI: 7.1361
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.9e-142575155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k++g
  XP_022143709.1 25 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDKAAIKYNG 75
                    89********.7******5553..2.26**********99************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSNFSKEEFV HILRRQSTGF SRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDSEI  60
EAARAYDKAA IKYNGREAVT NFDQSSYEGE ISIESENQDM GDIDLNLGIA PPCSSEDQKD  120
NLNGCAPNFI GFKNSDSERR CGVMLGNHAS VAVRPHPPCL SCANFFPTYQ ERAMEKRMEI  180
ESLPNWGWQI PSPYGGATSV HFFSTAASSG FPSSSSSAVL PQPSSARHLL PASTFFCHPL  240
PTVTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.32e-55AP2 family protein