PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143876.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 398aa MW: 43882.1 Da PI: 7.1668

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.8	2.9e-16	106	152	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+k Lq XP_022143876.1 106 VHNLSERRRRDRINEKMKALQELIPRC-----NKTDKASMLDEAIEYLKALQ 152 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MIASLRMNRC VPDFEMPDDY SLPPFSSFPT PRKPPLCEIT VTSSPGDSSA SAEPAAPKPA 60 ADDRKRKGRA PDDTECYSED VEYESPDAKK QLRGSTSTKR SRAAEVHNLS ERRRRDRINE 120 KMKALQELIP RCNKTDKASM LDEAIEYLKA LQLQVQMMSS MGCGMMPVMF PGIQQYLPPP 180 MGMGIGMGMG MGMEMGMNRP MMPFPNLLGG PNLPMQAGAA AHLGPRFPLP AFAMPPVPGS 240 DPSRVQPTNQ ANQMLNSVGT QHTIPPPVSG FSDSYQQFVS SNQMQFPATQ RLQNQQPIQP 300 DTSRPCTNRG PENFENHQSD CDRKKVELQM VMGNLLLLHE TSVSHCIALR WGRIRGEDAD 360 GSNLVTWCGR LLSSSSSGGI EVFETLQLQS HYHFAPGP

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MIASLRMNRC VPDFEMPDDY SLPPFSSFPT PRKPPLCEIT VTSSPGDSSA SAEPAAPKPA  60
ADDRKRKGRA PDDTECYSED VEYESPDAKK QLRGSTSTKR SRAAEVHNLS ERRRRDRINE  120
KMKALQELIP RCNKTDKASM LDEAIEYLKA LQLQVQMMSS MGCGMMPVMF PGIQQYLPPP  180
MGMGIGMGMG MGMEMGMNRP MMPFPNLLGG PNLPMQAGAA AHLGPRFPLP AFAMPPVPGS  240
DPSRVQPTNQ ANQMLNSVGT QHTIPPPVSG FSDSYQQFVS SNQMQFPATQ RLQNQQPIQP  300
DTSRPCTNRG PENFENHQSD CDRKKVELQM VMGNLLLLHE TSVSHCIALR WGRIRGEDAD  360
GSNLVTWCGR LLSSSSSGGI EVFETLQLQS HYHFAPGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	116	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-39	bHLH family protein