PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143898.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 223aa    MW: 25470.1 Da    PI: 5.9751
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF947.1e-301159351
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ien + rqvtfskRrng++KKA+ELSvLCdaeva+iifs++gklye++s
  XP_022143898.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59
                    9**********************************************86 PP
2K-box81.42.1e-27901741599
           K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        q+e+a+L k+ie+L+ ++R++lGedL+s+s+ eLq+LeqqLeks+ ++R++K e++ eqi++l++kek l+ en +L +k+e
  XP_022143898.1  90 HLNQEEAANLMKKIEQLEVSKRKMLGEDLGSCSIDELQELEQQLEKSVCRVRARKVEVFEEQISQLKQKEKVLEAENASLLEKWE 174
                     345899***************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVALIIFSP RGKLYEFASS  60
SMQATIERYR KHAKTKEVID SSSVNMQLEH LNQEEAANLM KKIEQLEVSK RKMLGEDLGS  120
CSIDELQELE QQLEKSVCRV RARKVEVFEE QISQLKQKEK VLEAENASLL EKWEREPVGG  180
EKEGQKGENL GNYTESSSPI SEVETELFIG PPETRPRTFL SLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-76MIKC_MADS family protein