PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143921.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 244aa    MW: 27277.5 Da    PI: 8.0845
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000147193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_022143921.1 71 YSCSFCKREFRSAQALGGHMNVH 93
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEMEEPKRCW MMWENKKKTI KRNLTAGSSD HHFDQSKASS SFDDSWEEQA FAEDTAGHLS  60
GSGCVWPPRS YSCSFCKREF RSAQALGGHM NVHRRDRARL KHESFKPQIE THQIPPQNNP  120
FPFTPSSETV CDDNLVGYNN PNPRSSSSSF LSVLPTQNVE KSDLTPITLN KFHQSSELSK  180
KASDLMDNID AVCCKRKRTD AASTVAFIFR SEVLGLSHGS VEDLDLELRL GGGGSGGRPK  240
PKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.11e-27C2H2 family protein