PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144160.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 412aa MW: 47045.8 Da PI: 7.6036

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	80.8	1.2e-25	155	220	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_022144160.1 155 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVL---KV--QKRRIYDITNVLEGIGLIEKTTMNHIRWKG 220 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSNAVEDLSH RLRHSDFRFH LLHPHSQHHR DMSSSSSSSA PALPLCFRQY HRPPPPRLNQ 60 SDTCAGRLAP DAHSTAAATL DLKQTYDINA AEALASRRAL ASEQRMRSDD SSCEPVSCAN 120 GKQNKKPKFQ KNSQSRTERS IDEPLDGLNL PTNGRYDSSL GFLTKKFIRL VQEAEDGTLD 180 LNKTADVLKV QKRRIYDITN VLEGIGLIEK TTMNHIRWKG CERRGPQELN DQVSRLKAEV 240 ESLYEDERRL DDIIRMKQEL LRNLEENANH RKNLFVTEED ILQIPCFKNQ TLIAVKAPQA 300 SCIEVPDPDE EACFSERQCR MIIKSTTGPI SLYLLRNQKQ GQEGSISKQA KLSSQQQKNP 360 NLSTTNNACS PFREFHGMQR ILPLHHNIDD DYWFHSNSQV SITHLWGEEH NF

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSNAVEDLSH RLRHSDFRFH LLHPHSQHHR DMSSSSSSSA PALPLCFRQY HRPPPPRLNQ  60
SDTCAGRLAP DAHSTAAATL DLKQTYDINA AEALASRRAL ASEQRMRSDD SSCEPVSCAN  120
GKQNKKPKFQ KNSQSRTERS IDEPLDGLNL PTNGRYDSSL GFLTKKFIRL VQEAEDGTLD  180
LNKTADVLKV QKRRIYDITN VLEGIGLIEK TTMNHIRWKG CERRGPQELN DQVSRLKAEV  240
ESLYEDERRL DDIIRMKQEL LRNLEENANH RKNLFVTEED ILQIPCFKNQ TLIAVKAPQA  300
SCIEVPDPDE EACFSERQCR MIIKSTTGPI SLYLLRNQKQ GQEGSISKQA KLSSQQQKNP  360
NLSTTNNACS PFREFHGMQR ILPLHHNIDD DYWFHSNSQV SITHLWGEEH NF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	194	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	5e-86	E2F/DP family protein