PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144161.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 344aa MW: 38416.3 Da PI: 8.5811

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3e-35	27	119	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++ XP_022144161.1 27 FLSKTYQLVDDPSTDHIVSWGQDLSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEKHLLCE 112 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_022144161.1 113 IHRRKTA 119 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSSVMVENCD GSLLLSLDSQ KSVPAPFLSK TYQLVDDPST DHIVSWGQDL STFVVWRPPE 60 FARDLLPNYF KHNNFSSFVR QLNTYGFRKI VPDRWEFANE FFRKGEKHLL CEIHRRKTAH 120 PQVSYSTGPT TFFPRLSISP SDSDDQLPNW PCDSPPPPLP TTTTNYNIIG IGIGSVATLS 180 QDNDRLRRNN CMLLSELAHM RKLYNDIIYF VQNHVKPVSP PPTTNSFLLS HPAPTHNSSQ 240 KPLNHFLGFC PNKHTSPGTV ATAHFLDSPT ATSKSAITEL DAFDNNSNTC RTKLFGVPLP 300 LSKKRLHPDT TYGSISSSNK SSSSRLVLEK GDNLGLNLMP PSNS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSSVMVENCD GSLLLSLDSQ KSVPAPFLSK TYQLVDDPST DHIVSWGQDL STFVVWRPPE  60
FARDLLPNYF KHNNFSSFVR QLNTYGFRKI VPDRWEFANE FFRKGEKHLL CEIHRRKTAH  120
PQVSYSTGPT TFFPRLSISP SDSDDQLPNW PCDSPPPPLP TTTTNYNIIG IGIGSVATLS  180
QDNDRLRRNN CMLLSELAHM RKLYNDIIYF VQNHVKPVSP PPTTNSFLLS HPAPTHNSSQ  240
KPLNHFLGFC PNKHTSPGTV ATAHFLDSPT ATSKSAITEL DAFDNNSNTC RTKLFGVPLP  300
LSKKRLHPDT TYGSISSSNK SSSSRLVLEK GDNLGLNLMP PSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	6e-99	HSF family protein