PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144182.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 229aa    MW: 25658.4 Da    PI: 10.5159
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.21.1e-16127217199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp +f++ h  +  ++  +tl de+g ++   +  rk++    l++GWk+F  a++L +gD vvF+l++   ++++v 
  XP_022144182.1 127 FIKSMLQSHVSGGFWLGLPSHFCKMHLPN--RDGVMTLIDEDGDEYPTVYLARKTG----LSGGWKGFSVAHKLADGDAVVFQLIK--PTTCKVY 213
                     89*********************999433..4458***************656665....***********************997..6667898 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_022144182.1 214 ILRA 217
                     8886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGIANLSYEE CRRKRLEENK KRMEALNLPL LSQALLDSSP SKSSPSKLAK PRVTQKQLVV  60
VRRSSRVAKQ SAPVYAEVLV KRVVIPRRIS KARDVSNRVY ASDESRKNAF ERAEKLQSGL  120
ERNHPNFIKS MLQSHVSGGF WLGLPSHFCK MHLPNRDGVM TLIDEDGDEY PTVYLARKTG  180
LSGGWKGFSV AHKLADGDAV VFQLIKPTTC KVYILRANSS REDSDSNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-63B3 family protein