PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144323.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 316aa    MW: 34777.4 Da    PI: 7.9305
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-051922311155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_022144323.1 192 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 231
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDLSANLHHQ LLQLENQLLI GSGSSHAWTP DIPLSPSGDF EPNFHFQDLN PGIDIAESFT  60
SLQPYHCSKL GQKFGETKEE EASGSSPKCT EDLDKFSQSC CCSKIHPTVN VSSRKPLMAE  120
FSSSLGFDQS LSFASSHYLM QQSRASSLLT KMPNHEISQA KRPCTLKQQK PTQATPKRTR  180
VEPRATCPPL KIRKEKLGDR IAALQQLVAP FGKTDTASVL MEAISYINFL QNQVEMLSHS  240
YMKSCRHRNY KTMCRDGLNE ENKEGESDLK GKGLCLVPLA SIFDLPEETG GGGGGGGRIG  300
GIWGPLAVAN FNRRTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-39bHLH family protein