PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144324.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 292aa    MW: 32134.4 Da    PI: 8.4169
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-051682071155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_022144324.1 168 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 207
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MLSHHPPSTT SPSGDFEPNF HFQDLNPGID IAESFTSLQP YHCSKLGQKF GETKEEEASG  60
SSPKCTEDLD KFSQSCCCSK IHPTVNVSSR KPLMAEFSSS LGFDQSLSFA SSHYLMQQSR  120
ASSLLTKMPN HEISQAKRPC TLKQQKPTQA TPKRTRVEPR ATCPPLKIRK EKLGDRIAAL  180
QQLVAPFGKT DTASVLMEAI SYINFLQNQV EMLSHSYMKS CRHRNYKTMC RDGLNEENKE  240
GESDLKGKGL CLVPLASIFD LPEETGGGGG GGGRIGGIWG PLAVANFNRR TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-39bHLH family protein