PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144416.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 392aa    MW: 42170.5 Da    PI: 8.0199
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.51.6e-11326125
                    --S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaH 25
                    yk  lCr+f+r G CkyG+rC+++H
  XP_022144416.1  3 YKKDLCRNFQR-GSCKYGERCRYIH 26
                    99*********.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MQYKKDLCRN FQRGSCKYGE RCRYIHATQQ PQNSGSFGFG MQTSSQHQQK PNPFGFGVHS  60
TGQSKAAADF GSKQNQYKPF ENKWTRSSTP SGNAPSQKSD NQPPSANHKC TDGESCKCQI  120
VEDFQNERPL WKLTCYGHSK SEPCDIVGDV SYEELRAIAY DEAKRGISLQ SIVERERNLL  180
NSKLAEFDSL LHKPYVTPVN HTPGNQSSFL GTNSHSTLPS AQNSAHPSLS SFSQLGASLN  240
TGFGARPSNP PNNAFGQPVQ LSSALRKSSA FGVANFPSTS AVAVAGALGS QLPSQTFGNS  300
TLSGFNNSGL ANIGSNLFSS PAILTNFPPT DASSTIFSTS SNLSAGEQIA SNAQLVHNLQ  360
QENSSVDVSI WLKEKWVPGE IPEVAPPDAV VQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.22e-81C3H family protein