PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144451.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 228aa MW: 26277.4 Da PI: 6.1632

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++++q+G g W+++++ g++R++k+c++rw++yl XP_022144451.1 5 AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP
2	Myb_DNA-binding	48	3e-15	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE +l+ ++ +lG++ W+ Ia +++ gRt++++k++w+ + XP_022144451.1 56 RGSFTPEEVDLIFSLHSLLGNR-WSVIAGRLP-GRTANDIKNYWNCH 100 89******************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MGGVAWTEEE DYLLKKCIEQ YGEGKWHRVP QLAGLNRCRK SCRLRWLNYL RPNIKRGSFT 60 PEEVDLIFSL HSLLGNRWSV IAGRLPGRTA NDIKNYWNCH LSKKLNGQLG GVEDQQANPT 120 KEEAFFGKPQ NWEHPQEESS KSRAKGKTCA ADHDQNINGE NSQEMILVQN QNQNLPIIVE 180 QQSNSMGSLG NLQMEFKALE DDHHQQGCNK REVWDDWISE MDLWIDSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	8e-55	MYB family protein