PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144457.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 360aa    MW: 40870.8 Da    PI: 6.2446
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-05108129223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C++Cgk F ++  L  H+r H
  XP_022144457.1 108 VCKICGKGFDSSKALFGHMRHH 129
                     6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGIFACVEKS IRLLLFTRSL QIRAMEQDQE QKQHICKLCN KSFSNGKVLG GHMRCHRTQN  60
QNPSKKRKKN PIDSYSLREN PKKSWKFSAP SPENGESAAP PPQEEKNVCK ICGKGFDSSK  120
ALFGHMRHHS GRRKDPIRRC KFLTSPQSAA PGDGGGETLG LLRRKRSRRS RCKYDSNPSE  180
VEELALCLLM LSRGEGNWGE HEFNESMYKS HLDDSLSKKM NRGENDLDLD LGSDSEIGRC  240
CEMVEMPKLE DEEQQQQQQQ QEGFEIGFCE ESEEVGENGV KCLKKSEIDH QCGVCLKVFG  300
SGQALGGHKR AHILKPHLIM ELQEQEQDEE EDDDDEFKPW WNVDGDNGQQ QLEVGLDCSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16569KKRKK
26586KKRKKNPIDSYSLRENPKKSWK
36687KKRKKNPIDSYSLRENPKKSWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-16C2H2 family protein