PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144460.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 176aa MW: 19888.6 Da PI: 10.0973

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.8e-17	40	85	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia +++ gR++k+c++rw++ XP_022144460.1 40 RGHWRPAEDAKLKELVALYGPQNWNLIADKLQ-GRSGKSCRLRWFNQ 85 899***************************.*********996 PP
2	Myb_DNA-binding	56.6	5.8e-18	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022144460.1 92 RRAFTEEEEERLMQAHRLYGNK-WACIARLFP-GRTDNAVKNHWHV 135 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MGCPSSQESC ENGRMISECS DGFLVVGKER DSGQSKLCAR GHWRPAEDAK LKELVALYGP 60 QNWNLIADKL QGRSGKSCRL RWFNQLDPRI NRRAFTEEEE ERLMQAHRLY GNKWACIARL 120 FPGRTDNAVK NHWHVIMARK CREQFSAYRR RKLAQPPCAP ASASASAAPR GNASPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-76	MYB family protein