PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144463.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 375aa    MW: 42610.6 Da    PI: 8.0823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.5e-12203250355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++h e+Er+RR+++N+ f  Lr+++P+ +      +++Ka+ L  Av YI++Lq
  XP_022144463.1 203 TSHVEAERQRREKLNHQFCCLRSVVPNiS------RMDKASLLSDAVLYIHELQ 250
                     689************************66......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEDFQISSAP CSSSSSALQQ KLQFIIQNQS QNQGQYWWTY AIFWRVTTTE NCRLLLAWVD  60
GYFQAGGRDV SMAERFYSMS VAREFEFDSN GDGDVLTKAF ISGREVWLSE LFQFGQSKRG  120
KEAERHGIRT LVCIPTPASP CGVLELGSQD TIREDLKFVE HLKSVFASDQ IFVVQSCNQL  180
RLEENTSWGR KSRVVGARGA PVTSHVEAER QRREKLNHQF CCLRSVVPNI SRMDKASLLS  240
DAVLYIHELQ AKIKDLEFEF SKRSNSKESK KAALVNQRRP NGGLIKVEVE VEVKIMGLEA  300
VIRVQTKNMS NTMAKLMEAL RDLELKVHHA SMLNLNDFTL HDVVVGLRPD QKQTNIEEEA  360
IRMSLLKTLH HPSSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-53bHLH family protein