PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144471.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 704aa MW: 77463.4 Da PI: 10.4058

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.1e-10	15	52	3	33
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......T CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......k 33 +W t+E++ll++avk++G ++W+++a +++ + XP_022144471.1 15 SWGTWEELLLACAVKRHGFKDWNSVAMEVQarsslphL 52 6****************************955554444 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MAEDKERESE QSAASWGTWE ELLLACAVKR HGFKDWNSVA MEVQARSSLP HLLITAPNCE 60 LKFLDLKRRF TSFQNDAVFN QNGGGIADKI DNAIPWVDEL RKLRVAELRR EVQRYDVSIS 120 SLQLKVKRLE EEREHGLNDR DAGTGKPDLK TESRERRSEN DKKLFGEPDY RSGPNGTVSK 180 PPLPAVPGED SDREDFSVNQ SNSTGSKSGN RKSTGENVKS ETKPEFAGSF RSEQNRRASE 240 PAGPQSDDGS TDTVAKNPTC DISETEKKPQ RVGGDSSELA DSEAQSNGGE TATRESSEVQ 300 SSASLTGRMK RKRLLRKEIS GGSSGNEPRR TATVKSRRFD DILQMIRAHK HGSFFESRLQ 360 SQESEEYKGM VRQHLDLEMV QAKVNSGSYS SSSLAFYRDL LLLCNNAVIF FPKFSKEAVA 420 ACELRLLVSN ELKKSLQVVR TDPSPEVVDS SPAVPSRSKG ADLEGSHSLL AKQKSSVPII 480 VCRKRSKISA KLSSSLGEKD RSSNDEKSAV DIKPTVKKAS NAVEDHGTTK DSKVKEKPVT 540 GARSMRRSND STTNSSGPSI KKQNASSGWK PGSANEMETS TPDKKKPETV ALEKKRSAAD 600 FLKRIKQNSP AETIKRNSRV GSGSSCGNAT AEQKKGSTKS DKGKERASLR QSNDKKRVKD 660 DASPSKRSVG RPPKKAEAEP VPTKRAREGG GKEPLKRPKK RSRR

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MAEDKERESE QSAASWGTWE ELLLACAVKR HGFKDWNSVA MEVQARSSLP HLLITAPNCE  60
LKFLDLKRRF TSFQNDAVFN QNGGGIADKI DNAIPWVDEL RKLRVAELRR EVQRYDVSIS  120
SLQLKVKRLE EEREHGLNDR DAGTGKPDLK TESRERRSEN DKKLFGEPDY RSGPNGTVSK  180
PPLPAVPGED SDREDFSVNQ SNSTGSKSGN RKSTGENVKS ETKPEFAGSF RSEQNRRASE  240
PAGPQSDDGS TDTVAKNPTC DISETEKKPQ RVGGDSSELA DSEAQSNGGE TATRESSEVQ  300
SSASLTGRMK RKRLLRKEIS GGSSGNEPRR TATVKSRRFD DILQMIRAHK HGSFFESRLQ  360
SQESEEYKGM VRQHLDLEMV QAKVNSGSYS SSSLAFYRDL LLLCNNAVIF FPKFSKEAVA  420
ACELRLLVSN ELKKSLQVVR TDPSPEVVDS SPAVPSRSKG ADLEGSHSLL AKQKSSVPII  480
VCRKRSKISA KLSSSLGEKD RSSNDEKSAV DIKPTVKKAS NAVEDHGTTK DSKVKEKPVT  540
GARSMRRSND STTNSSGPSI KKQNASSGWK PGSANEMETS TPDKKKPETV ALEKKRSAAD  600
FLKRIKQNSP AETIKRNSRV GSGSSCGNAT AEQKKGSTKS DKGKERASLR QSNDKKRVKD  660
DASPSKRSVG RPPKKAEAEP VPTKRAREGG GKEPLKRPKK RSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	696	704	KRPKKRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	1e-106	MYB_related family protein