PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144619.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 266aa MW: 29817.2 Da PI: 7.7612

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + +++ g++R++k+c++rw++yl XP_022144619.1 14 KGPWSPEEDAKLKDYIQKHGTGgNWISLPQKSGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	43.1	1e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd l+ ++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022144619.1 69 GDFSEEEDALICNLFATIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGRTPCCDKA NVKKGPWSPE EDAKLKDYIQ KHGTGGNWIS LPQKSGLKRC GKSCRLRWLN 60 YLRPDIKHGD FSEEEDALIC NLFATIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLMSI 120 NNTNIIPPSH QIKNPPFLHQ HSSTNSSSPS SSSPSSYSYS YSYSDQSSPI WSFSNLDPMI 180 SIFSPNNNNN NNNLVNPTTP LLFPQDQARF NMISPMVQAS CSSNSDGSGE NQSYQEPPLL 240 DYGLEEIKQL ITSTACTNFF FDDQTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	5e-76	MYB family protein