PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144687.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 333aa    MW: 36372.4 Da    PI: 6.7417
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.22e-17228262135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022144687.1 228 CLHCQAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 262
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEVNKFLIGG YFDAGAGQFS PEKAKAAEHF TIDDLLDFSN EDAMVTDGFF DNVAGASTDS  60
STVTAVDSCN SSVSGGDHHF HGNIGSQSFG ESQLSSDLCI DPYDDLAELE WLSNFVEDSF  120
STEGKDLQAL HYLSSSHSIS KPQTPETSSS SELPPSVSIP SDTSKNAPRF PAETPLPCKA  180
RSKRSRTAPC DWTTRLLHLL SPADPKPPKS STSKKKEASN SESSGRKCLH CQAEKTPQWR  240
TGPMGPKTLC NACGVRYKSG RLVPEYRPAA SPTFISAKHS NSHRKVLELR RQKDLQMAQQ  300
QQFISHSSIF GVTNGCDEYL ISHHMGPTIR HMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-65GATA family protein