PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144721.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 243aa MW: 27545.9 Da PI: 6.9497

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.1	8.4e-20	66	119	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++++eqle Le+ F+++ +++ +++++L+k+lgL+ rq+ vWFqNrRa++k XP_022144721.1 66 KKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWK 119 45679************************************************9 PP
2	HD-ZIP_I/II	119.7	1.5e-38	65	157	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rls+eq+++LE+sF+ee kL+p+rK++l++eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk+++da+++e+++L++ev +L++ l+e XP_022144721.1 65 EKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAIAREKHKLQEEVMKLKSMLRE 157 69**************************************************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEWATGSFRP FVSRAPESSF GFLYNYNLEQ YQGIDVKNSG MAGASETVLQ GLVPGMDVNG 60 YGNMEKKKRL SSEQLESLER SFQEEIKLDP DRKQKLSKEL GLQPRQIAVW FQNRRARWKA 120 KQLEHLYDTL KQEFDAIARE KHKLQEEVMK LKSMLRELQT ARNQVSTVYT DLSGEETVES 180 TSVGAGCSSK PRAVATVAAA AATTTNHYQA PPDQQCNYVF NTEDYNPMSP TFWGTLPSSY 240 HPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	95	KKKRLSSEQLESLERSFQEEIKLDPDRKQK
2	114	122	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-40	HD-ZIP family protein