PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144763.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 237aa MW: 28068.6 Da PI: 7.8889

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.8	6.9e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd++l v+++G W++Ia+ g+ Rt+k+c+ rw++yl XP_022144763.1 14 RGPWLEEEDKQLTTFVTRMGESKWDSIAKASGLERTGKSCRFRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	49.8	7.9e-16	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++ eE+e +++++k++G++ W++Iar ++ gRt++++k++w++++ XP_022144763.1 68 GCMSSEEEEVILKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRNHM 112 67899**************.*****.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MANQSALQSE TLRRGPWLEE EDKQLTTFVT RMGESKWDSI AKASGLERTG KSCRFRWLNY 60 LRPNLKHGCM SSEEEEVILK LHKKWGNKWS RIARWLPGRT DNEIKNYWRN HMRKKLPIQQ 120 EESKVKHGKQ DKLSFKQCAM GGSPRQDHNE RKDIPLSNVS HNLFGFPNFE ITSSPYEIRL 180 SNWILDHLSN EKLEVNHYED QYNSLEFCFC HPNMNCAVRD DQTDHLWDSL ASLWDME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-55	MYB family protein