PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144859.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 294aa    MW: 33377.7 Da    PI: 6.0802
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.64e-33111022102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y++++d+ ++ +i+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+ +ll++
  XP_022144859.1  11 FVMKTYQMVNDPLTDAFITWGSASNSFLVVDPLHFSHTLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANQWFLRGQFHLLKN 96 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i rkk+
  XP_022144859.1  97 IVRKKH 102
                     ***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEGNCSIVAP FVMKTYQMVN DPLTDAFITW GSASNSFLVV DPLHFSHTLL PAYFKHNNFS  60
SFVRQLNTYG FRKVDPDRWE FANQWFLRGQ FHLLKNIVRK KHTPNSNSNS NLSFVGDHDE  120
ELAREISRLR KEQRALEEEL EGMKKRLETT EKRPHQMMTF LHKVVEDPEI LPLMMLHRDP  180
AAADKKRRFI VSSSYSSSPS TTEDDAEPNP GPNFCSPDTG FDVDNFVQSS PAEFCGHLPW  240
IMEQPNRSME GLGLTHCTAV APMEISIGTT AVEETHSPPP PPPPYPFSLF GCGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-79HSF family protein