PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144997.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 385aa    MW: 42741.1 Da    PI: 7.0839
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.91.8e-08142162526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_022144997.1 142 ACPDFRK-GSCKKGDSCEFAHG 162
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MMLGERHRPA AVVHITPLMI PEEPANETRF PFPLSGISVS PDGNVNGGGD YSPYYLQEAL  60
AALQRYLPPA NESEIESDSE MLARESDVPV DAYSCDHFRI FEFKVRKCTR GRSHDWTECP  120
YAHPGEKARR RDPRKYNYSG TACPDFRKGS CKKGDSCEFA HGVFECWLHP ARYRTQPCKD  180
GTNCRRRVCF FAHTPEQLRV LPQQSPRSAN SPDSYDESPL RQSLDGSCAK SLPFLSSPVS  240
VSPSATPVDS PPLSPMTRSL GRSLGSSNIN EMVASLRNLH LSKVKSLPSS WNAQVGSPSY  300
HSRIRPGFCS LPTTPTRAPT GHGIGLLDFL DHGFEEEPAM ERVESGRELR AKMLEKLSKE  360
NSLDLVDSSP SVCAPDVEWV SELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-125C3H family protein