PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145017.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 228aa MW: 25236.2 Da PI: 6.8662

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed l+++++++G+g +W + +r+ g++R++k+c++rw++yl XP_022145017.1 14 RGPWSPQEDATLKNYIHKHGTGgNWIALPRKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	41.2	3.8e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++T+eEd + + G++ W+ Ia+ ++ gRt++++k++w++ XP_022145017.1 69 GSFTEEEDSVICTLYSSIGSR-WAVIASQLP-GRTDNDVKNHWNT 111 79*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MGRAPCCDKA TVKRGPWSPQ EDATLKNYIH KHGTGGNWIA LPRKAGLNRC GKSCRLRWLN 60 YLRPDIKHGS FTEEEDSVIC TLYSSIGSRW AVIASQLPGR TDNDVKNHWN TKLKKKFNSV 120 SETPNPTVAA AAAAAADGHH NATTDITFPA NTPLFPNANI LFSTPLNFDP QEFPTMDRFP 180 TTEQTQIPFS GNGGGSDDGE ILLSYGFYQY PYEDHLAEGL FDVSYYMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-70	MYB family protein