PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145065.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 244aa    MW: 28003.8 Da    PI: 9.5114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.3e-13126220283
                     EEE-..-HHHHT.T-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--...TT-EEEE CS
              B3   2 fkvltpsdvlks.grlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk...egDfvvF 82 
                     +k lt sdv +  grl + k+f++++          +++ +e++++t+++++gr++ ++++++ ++  yvl kGWk F+kan+L    +g+f+++
  XP_022145065.1 126 EKRLTVSDVAEAqGRLAIGKEFVTKYlapmfnnkdeNENLREGIEVTVYNREGREFGMTFKIWASK-LYVLMKGWKPFCKANNLThahAGEFLTL 219
                     57778888877669****************9987664444599*****************888886.799999***********75557777776 PP

                     E CS
              B3  83 k 83 
                      
  XP_022145065.1 220 W 220
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGKDDNKKEE DSEVYEAAMT LYMMSKSNEG SVTRFLPTSR LTTFPQGVTL FKKPKKKRHY  60
INDNVHNNNN VNVDEERQPS SSRNKQVNQE APPDPPNNNN DGEERRGMPP VPAIRDVIGQ  120
CSRAYEKRLT VSDVAEAQGR LAIGKEFVTK YLAPMFNNKD ENENLREGIE VTVYNREGRE  180
FGMTFKIWAS KLYVLMKGWK PFCKANNLTH AHAGEFLTLW MFRHRRTHGL CFAIILGTPM  240
NHPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.11e-19B3 family protein