PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145117.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 233aa MW: 26537.2 Da PI: 9.9085

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.4	2.7e-44	16	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yL++++ +++l++ vi+++d+ +++PwdLp + e+e yfFs+++ k + + + rat+sgyWk g d++++s+ XP_022145117.1 16 LPPGFRFHPTDEELVVQYLRRRALSSPLPA-AVIPDADVRRFDPWDLPGE---LERERYFFSTKEAKFCNRRTSIRATASGYWKPGGIDRRIVSS 106 79**************************.89***********54...46899********99999***************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg kktLvfy+g+ap+g +tdW+mheyrl XP_022145117.1 107 gQNQLVGFKKTLVFYTGKAPNGLRTDWIMHEYRL 140 67778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MEKKNQSFLN NGVLRLPPGF RFHPTDEELV VQYLRRRALS SPLPAAVIPD ADVRRFDPWD 60 LPGELERERY FFSTKEAKFC NRRTSIRATA SGYWKPGGID RRIVSSGQNQ LVGFKKTLVF 120 YTGKAPNGLR TDWIMHEYRL VHAPEAPLCA INGGQSTLNC DWVLCRVFLK KKKILKPIFH 180 EFLRRRNGTD LNISPSCSSS SGSGSSGVTE ISVNNRHQEQ EETSSYNCFT TTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-71	NAC family protein