PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145122.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family FAR1
Protein Properties Length: 256aa    MW: 29494.3 Da    PI: 6.186
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1821.1e-2575165190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF+vr++++++s+ n++++ ++fvCskeg+r+++    +++     + tr gC+a++++ +++ gkw vtk++++HnH l 
  XP_022145122.1  75 EFYVNYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCrKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLL 165
                     6*****************************************9987723333448899******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDCESNHTFD SDESDVDIQA EIYEKGGSID DIHKNLNFCL REDDKVAEQS VVDFPVDGVE  60
PYIGMEFGSR DEAREFYVNY GRRIGFTVRI HHNRRSRVNN QVIGQDFVCS KEGFRAKKYV  120
CRKDRILPAP PITREGCQAM IRLALRDGGK WAVTKFVKDH NHLLLSPSKV PWRGSGKNLL  180
GEDEKDKRIR ELSVELYNER QKCKRKCAAY EEQLKAILKE LETHTECISN KVAEVVKSIR  240
EIEEEEESGG LNQGWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-40FAR1 family protein