PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145130.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 220aa    MW: 24781.8 Da    PI: 5.0901
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.8e-15104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rWT++E+ l++ + +++G+g+Wk Ia ++  +Rt  q+ s+ qky
   XP_022145130.1 104 RWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 148
                      9*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MEEQLPPLLS LDDWDIDGFY NETMPLPSAP APAPEVRQEM QFPVELVNSD NNPSPMVLLE  60
LSSDDDVAET TTTNVLLSDV SSAVNLPERP GAEEAGSGNL PVRRWTKDEH MLFLMGLEKY  120
GNGNWKEIAT EFVVTRTSTQ VASHAQKYCK YRQNPNINQR NGKSCRSKSS IFDITAVDPH  180
SRVRLLRRRR APAAIQPPLP PLQVQQFTIT NYYPPPHQQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.18e-21MYB family protein