PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145143.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 173aa    MW: 19277.5 Da    PI: 7.2127
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.65.8e-1383127347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT++E++l++ + + +G+g+Wk+Ia ++  ++t+ q+ s+ qk+
   XP_022145143.1  83 CWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKF 127
                      5******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MQNSEFFYSD SDFYSSGHFP AGRTPTNENH CIGNDIMSDY LTYSPLSSIQ WELEDGSSAL  60
DPTTPVSDLG PSPSPEKKRK VTCWTKDEHK LFLIGLQIYG KGHWKSIATE VAVTKTAAQV  120
ASHAQKFYSR KLSSEQSRKR SSINDITTVD VETMSRFLAG RPAVAHFNPH STI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.16e-27MYB family protein