PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145252.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 767aa MW: 85177.8 Da PI: 4.7213

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	553	590	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022145252.1 553 RQQIQDRIKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 590 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MGETEVGSVL SRICRSNRWS YAVFWSFDQR NSMLLTLEDI WYEEQVGLIA ANMLHQVHIL 60 GEGVIGTAAF TGKHRWIFSD ASIGEWNSSI FQDNLEFQQQ FSCGIKTVAV IPVHPHGVMQ 120 LGSIHKILES LEFLADAKRS LSQVINDDWS LSAMHNNNHT DFTGKSYASI EKQQAFDSSY 180 FSKSSCETSV LTSSEPLPRS DVREQDAQHP SYLDGHILES CIDDMDYGNQ SSTFASVSSR 240 TGFPHTDNVQ QSVQLLPLTE GELMESVTCL PDFHDKHISE DFTMDLPDIS LVEDLFQWFD 300 SSPEIRPNGA ATTTLNDNLP QSVGVPTLSS NLVEVNKSTD DLTGVSAQSL ITHGSQSSGQ 360 DKTVRIQNAK DRLFDSLGLD TGFPVAKSWD NLITEAHGSY SGGCNSMSTC TSKLADGSSD 420 LPRKRLFWEL GIEELLDGLN NTSSATKSSV ENHQSSASKR SKMERWSLDS NPIQLADPCI 480 NMNLTQPLCT VDRFPCKKDA VPKSQVSSWI DDSYSTNIGG SLLELSQKSE EPAKTSKKRA 540 RPGESNRPRP KDRQQIQDRI KELRGIIPSG AKCSIDSLLD RTIKYMLFLQ SVTKYADKLK 600 ETNKPKLIDQ ENGVALNDKC TMERGSGGVT WAFKVGATPM VCPVIVEDLS SPGQMLVEML 660 CEERGFFLEI ADMIRSYGLT ILKGVMEIRE DKIWAQFVVE VKLNTNQSIT RINVFLSLME 720 LLQQANIGET ELPNHQSNNA MDSDVPLMDC FQNPTLQIPI TLAEALQ

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MGETEVGSVL SRICRSNRWS YAVFWSFDQR NSMLLTLEDI WYEEQVGLIA ANMLHQVHIL  60
GEGVIGTAAF TGKHRWIFSD ASIGEWNSSI FQDNLEFQQQ FSCGIKTVAV IPVHPHGVMQ  120
LGSIHKILES LEFLADAKRS LSQVINDDWS LSAMHNNNHT DFTGKSYASI EKQQAFDSSY  180
FSKSSCETSV LTSSEPLPRS DVREQDAQHP SYLDGHILES CIDDMDYGNQ SSTFASVSSR  240
TGFPHTDNVQ QSVQLLPLTE GELMESVTCL PDFHDKHISE DFTMDLPDIS LVEDLFQWFD  300
SSPEIRPNGA ATTTLNDNLP QSVGVPTLSS NLVEVNKSTD DLTGVSAQSL ITHGSQSSGQ  360
DKTVRIQNAK DRLFDSLGLD TGFPVAKSWD NLITEAHGSY SGGCNSMSTC TSKLADGSSD  420
LPRKRLFWEL GIEELLDGLN NTSSATKSSV ENHQSSASKR SKMERWSLDS NPIQLADPCI  480
NMNLTQPLCT VDRFPCKKDA VPKSQVSSWI DDSYSTNIGG SLLELSQKSE EPAKTSKKRA  540
RPGESNRPRP KDRQQIQDRI KELRGIIPSG AKCSIDSLLD RTIKYMLFLQ SVTKYADKLK  600
ETNKPKLIDQ ENGVALNDKC TMERGSGGVT WAFKVGATPM VCPVIVEDLS SPGQMLVEML  660
CEERGFFLEI ADMIRSYGLT ILKGVMEIRE DKIWAQFVVE VKLNTNQSIT RINVFLSLME  720
LLQQANIGET ELPNHQSNNA MDSDVPLMDC FQNPTLQIPI TLAEALQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	7e-78	bHLH family protein