PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145395.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 193aa    MW: 21171.1 Da    PI: 6.0093
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.6e-053860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022145395.1 38 YTCTFCRREFRSAQALGGHMNVH 60
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MWNPNQPHQD DDDDSWEIRA FAEDTGNIMG TTWPPRFYTC TFCRREFRSA QALGGHMNVH  60
RRDRARFHHQ TQPNSIQPIS SPSSSSFAVP TAEDIYGGGG GGFCFFYQLP NDNGGFLNPI  120
TSGACLRSPY PSNSSSLPSA KSPEELRGTS SASSSHCSHI SSKGDHESLI SIDDGDDPKL  180
DLELRLGHRP SPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.14e-30C2H2 family protein