PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145492.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 482aa    MW: 55674.5 Da    PI: 8.5157
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH231.4e-07438460225
                     -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaH 25 
                     k+ +Cr++a+ G C +G++CkF+H
  XP_022145492.1 438 KQQRCRYYAE-GRCYFGENCKFSH 460
                     8899******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MAFSGRFEPT PRRSELEEII DDDGESDDEY DSDDSECDPS YSIEEKSNSK ISRTSIRKKS  60
KPLNDVDMEL IAEADMDDAA PNVTILNEND EKDIHEVLQI IKAGKLEKLK VEQCKVYLRK  120
NGLRLTGTKD VLIQRINEHL EILNGGGAKK YPDYSFILDC KGDACMGDVV MFEQKVYEMY  180
NVASRSSIGP SCGTRTVAGR IVKESYGASK QQHTFTIEVL WSKGEKPLPP LHPLLIKGRN  240
LYRMKTLRQT WEDEEERQKV LMEKHARGSL ARSNREARVL EKEKRKTHKD NRISRREGFS  300
ENPSQSNLTS AGTMLAESMV SLSVDSRKMG IHQHQQGPLC GNPGKPLQRH QSENRTMQTK  360
SDLFINHRKQ PFQENYLTQP RIKVDPPASY NTQPRIYRAD HAASVNKVLD GTNHTSWNXY  420
RLPMGVYHHP IVKNQPDKQQ RCRYYAEGRC YFGENCKFSH EMMTERRDEE RWRHTHHARL  480
CR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1284288KRKTH