PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145530.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 299aa MW: 34961.4 Da PI: 8.5201

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75	1.3e-23	47	129	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e+++++ ++k++k lWe ++km+++gf+rs++qCk+kw+nl +ryk ++++e + s++++p++++l+ XP_022145530.1 47 QWSIQETKEFLMIRAELDQAFMETKRNKLLWELTASKMKQKGFNRSAEQCKCKWKNLVTRYKGCETMEPEI---SRQQFPFYTELQ 129 7******************************************************************97...55679**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MEGHHPHHPL LHLHHQQQQH LQHPPPHLHQ NLPLAADQAA AADRFPQWSI QETKEFLMIR 60 AELDQAFMET KRNKLLWELT ASKMKQKGFN RSAEQCKCKW KNLVTRYKGC ETMEPEISRQ 120 QFPFYTELQA IFGARMQRIL LAEAESGGSG SRKKTTTMAA LSSDDDEEND DSEGVADTKV 180 SSRKRKKAKA AATGGGGSGS SSINHLKEIL EEFMNQQMQM EVQWREAFEA REKERQIREI 240 EWRRNMEALE QERVMLERRW REREEQRRTR EEARADKRDA LITALLTKLS RSDHHHHNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	187	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	6e-65	Trihelix family protein