PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145648.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 755aa    MW: 85164.6 Da    PI: 5.8815
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS392.25.8e-1203807511374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d+++a++lL++++++asp gd +qRla++f+ +L+arla+++s++yk l  ++ts    +++l+a++l+  ++P+ k+s+
  XP_022145648.1 380 LRTLLISCAQAVAADDHRNATELLKQIRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTS---AADVLKAYHLYLAACPFRKISN 471
                     6789************************************************************888888...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t N++I++a+e+++r+H+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +ak++e+
  XP_022145648.1 472 FTSNRTIMNAAENATRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGfrPAERVEETGRRLATYAESFNVPFEYNA-IAKKWET 565
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E l+Vn+ ++ ++lldesvs+es+r++vL+l+ +++P+++++   +  +n++ F++rf eal ++sa+fd+le+ +pre+ er+
  XP_022145648.1 566 ITVEDLNIDKDEFLVVNCLYRAKNLLDESVSTESPRNTVLRLIHKINPNLFIHGVVNGAYNAPFFVTRFREALFHFSAIFDMLETIVPREDWERM 660
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E+e++gre+ nv+aceg er+er et+++W+ r+++aGF ++p++ ++ + a   +r  + + + ++e+s ++++gWk+r ++++SaWr
  XP_022145648.1 661 LLEKEIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFVQLPIGPEIFERAVDKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWR 751
                     **************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 755 aa     Download sequence    
MDPRLGRHAG SINGILLGNG SFAVQSQENA VGRPGFQNTI LSRNFQEFRC LAPDPSPSNI  60
ASSSSFLTSS SNASHEEDYL EDCDFSDAVL RFINQILMEE DMEDKTCMLQ DSLDLQAAEK  120
SFYDVLGKKY PPSPEPNRSL AIQYSDSFNG ELCGDSSNYL NSYNNTSYSG DDNPFETLDV  180
FQIRSTLGDT ISPSSNSSSN SIISGVDGLV DFSNNTIQVP ESNNRSQSIW QFQKGFEEAS  240
KFLPGGNDLC LDFDVNGSVT QGPDEGTSQI YVKAKRKDQR NILSLESRVR KNPHDEDGDL  300
EEERSSKQAA VFTESTLRSK MFDIVLLCSA GEGHDRLASF RQELQNAKIR SMMQTGQLKQ  360
SSGGRGRRKK QSGKKEVVDL RTLLISCAQA VAADDHRNAT ELLKQIRQHA SPFGDGNQRL  420
ASCFADGLEA RLAGTGSQIY KGLINKRTSA ADVLKAYHLY LAACPFRKIS NFTSNRTIMN  480
AAENATRLHV IDFGILYGFQ WPTLIQRLSW RKGGPPKLRI TGIEFPQPGF RPAERVEETG  540
RRLATYAESF NVPFEYNAIA KKWETITVED LNIDKDEFLV VNCLYRAKNL LDESVSTESP  600
RNTVLRLIHK INPNLFIHGV VNGAYNAPFF VTRFREALFH FSAIFDMLET IVPREDWERM  660
LLEKEIFGRE ALNVIACEGW ERVERPETYK QWQFRIMRAG FVQLPIGPEI FERAVDKVRS  720
SYHRDFLIDE DSRWILQGWK GRIIYAISAW RPAIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein