PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145778.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 293aa    MW: 32488.8 Da    PI: 6.9699
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-144084147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_022145778.1 40 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 84
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MIIDQMNSNA SNPQSSMAAS TAADSSGKKV RKPYTITKSR ESWTEEEHDK FLEALQLFDR  60
DWKKIEDFVG SKTVIQIRSH AQKYFLKVQK NGTMAHVPPP RPKRKASHPY PQKASKNVLV  120
PLQASMAYPS SVNTLAPGYS PWDDTSIMIN PSSSKIMQPQ DEFTNLHRSD ADIASEGTAM  180
IISSSFNGIG SPDMANQGKQ APMLHGLPDF AEVYGFIGSV FDPDSKEHVN KLKEMDPINF  240
ETVLLLMRNL TFNLSSPDFE PLRTVLSTYD VNTKTVAVTA GMPTKTHTDD ISC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-125MYB_related family protein