PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145896.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 255aa    MW: 28414.1 Da    PI: 7.0741
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++++G g+W++ ++  g+ R++k+c++rw +yl
   XP_022145896.1 14 KGPWTPEEDQILINYIALYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding55.31.5e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_022145896.1  67 RGNFTKEEEETIIKLHELLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVRAPCCEKM GLKKGPWTPE EDQILINYIA LYGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF TKEEEETIIK LHELLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRPTQNY  120
AAAVNRRSCG GDIPAGGQES AAQSSKFAPN FQCMQSSSPP HCSSESSSVV TAENGGDLSI  180
KNVPEADEKF WLEVLANDQI AGGMGILPGF GGENQGQGQF GNLTMEPVHE TMDFWIIFSQ  240
EEGNFLSLNK YYDPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-76MYB family protein