PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146006.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ERF

Protein Properties

Length: 218aa MW: 24554.5 Da PI: 5.0666

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.7	1.4e-18	83	133	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g XP_022146006.1 83 SYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFSMRG 133 69*****.******422...25***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
METSYFSFSD SDFSTESSFG SSEMESSFSW SEIFSIHGSL AFPDDFLGSQ TSGTESKIVV 60 KEEIEVSSTD FEEEKQRKTP EKSYRGVRRR PWGKYAAEIR DSTRHGVRVW LGTFDSAEAA 120 ALAYDQAAFS MRGSMAVLNF PVEMVRESLQ DIKYQLEEGC SPVVALKRKH SLRRKSAAAA 180 VEKKKKIKKT NNVMILEDLG TEYLEELLML SSCESSLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	186	KRKHSLRRKSAAAAVEKKKK
2	167	189	KRKHSLRRKSAAAAVEKKKKIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23240.1	2e-45	ERF family protein