PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146014.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 208aa    MW: 22865.9 Da    PI: 7.3626
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.52.5e-39181181100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC++dC++apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq++ l+++l
  XP_022146014.1  18 PCGACKFLRRKCVADCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQL 112
                     7*************************99******************************************************************* PP

          DUF260  95 allkee 100
                      ++k++
  XP_022146014.1 113 MQAKAQ 118
                     999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MASSSTGNYN NSVSGSSPCG ACKFLRRKCV ADCIFAPYFC SEQGPARFAA IHKVFGASNV  60
SKLLLHVPVP DRCEAVVTIA YEAQARIRDP VYGCVAHIFA LQQQVAYLQT QLMQAKAQLA  120
QTLIDSEGNY MEKSSNLPTG SFPNFPQSSL ESAANSDEAI MMNNFQEESQ SRSPEELAHQ  180
FQQFSRKRLA CHGDVGELQA LALRMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.13e-73LBD family protein