PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146034.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 241aa MW: 26719.6 Da PI: 6.6326

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	124.4	5.9e-39	7	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp +er +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+l XP_022146034.1 7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQL 101 7***********************89***************************************************************** PP DUF260 95 allkee 100 a+lke+ XP_022146034.1 102 ASLKEQ 107 *99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLARLPLTE 60 RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKEQAAE SIMNGGSDNG 120 GGGVNEKSYC RKVPCHPQDL HSWFQSGHLN NVTPEFNPNP THNPYCDENY RIMVNSQSNG 180 NYEHNHLAKM EESGSYGSFE ETSANYSMYS LDHIQSNAQQ WSFNESADDL QSVAFGNTRH 240 W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	8e-56	LBD family protein