PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146038.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 80aa    MW: 9409.74 Da    PI: 6.5278
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32.1e-093774544
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +++E++l+ + +k+ G + W++Ia +++ gRt+ ++  +w
   XP_022146038.1 37 SEQEEDLICRMHKLVGDR-WDLIAGRIP-GRTAVEIERFW 74
                     799*************99.*********.********999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MEDEAKKMEK QPQKQSKSRN SSSEEVTSLE WKLIQISEQE EDLICRMHKL VGDRWDLIAG  60
RIPGRTAVEI ERFWILKHAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.11e-34MYB_related family protein